Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.79□□□□□ -0.52
Lims1Q99JW4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lims1Q99JW4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.78□□□□□ -0.52
Lims1Q99JW4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.78□□□□□ -0.52
Lims1Q99JW4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Gm6218-201ENSMUST00000219812 628 ntBASIC11.78□□□□□ -0.52
Lims1Q99JW4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Itm2b-204ENSMUST00000228637 783 ntBASIC11.78□□□□□ -0.52
Lims1Q99JW4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lims1Q99JW4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lims1Q99JW4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lims1Q99JW4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Gm7488-201ENSMUST00000117148 684 ntBASIC11.77□□□□□ -0.53
Lims1Q99JW4 Gm16202-201ENSMUST00000117532 544 ntBASIC11.77□□□□□ -0.53
Lims1Q99JW4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Gm9630-201ENSMUST00000178304 885 ntBASIC11.77□□□□□ -0.53
Lims1Q99JW4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.77□□□□□ -0.53
Lims1Q99JW4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.77□□□□□ -0.53
Lims1Q99JW4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms