Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb20Q91XZ9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Vmn1r-ps110-201ENSMUST00000117530 1094 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm14854-201ENSMUST00000117758 841 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm29588-201ENSMUST00000185738 298 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Sh2d1a-207ENSMUST00000189753 1223 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm18547-201ENSMUST00000192439 811 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm7287-201ENSMUST00000205267 602 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm45217-201ENSMUST00000206576 1026 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm5650-201ENSMUST00000209641 598 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb20Q91XZ9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm15018-201ENSMUST00000117090 633 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm14550-201ENSMUST00000117918 407 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm12400-201ENSMUST00000120915 1003 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm6542-201ENSMUST00000153606 772 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm8602-201ENSMUST00000184045 607 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm43433-201ENSMUST00000196573 481 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm5035-201ENSMUST00000215581 927 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms