Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Gm14109-201ENSMUST00000118814 309 ntBASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Gm37201-201ENSMUST00000191845 523 ntBASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb5Q91XZ5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Gm13570-201ENSMUST00000140763 309 ntBASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb5Q91XZ5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Gm8885-201ENSMUST00000189382 598 ntBASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Gm8712-201ENSMUST00000221090 701 ntBASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms