Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb6Q91XZ4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb6Q91XZ4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb6Q91XZ4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb6Q91XZ4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb6Q91XZ4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb6Q91XZ4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb6Q91XZ4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
Pcdhb6Q91XZ4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb6Q91XZ4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb6Q91XZ4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Gm29649-201ENSMUST00000185649 419 ntBASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb6Q91XZ4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm26185-201ENSMUST00000157692 266 ntBASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm17208-201ENSMUST00000168388 535 ntBASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm7029-201ENSMUST00000173226 450 ntBASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm8099-201ENSMUST00000200510 742 ntBASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb6Q91XZ4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms