Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb8Q91XZ2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb8Q91XZ2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb8Q91XZ2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb8Q91XZ2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb8Q91XZ2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb8Q91XZ2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb8Q91XZ2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm38671-201ENSMUST00000200573 130 ntBASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm45384-201ENSMUST00000210451 277 ntBASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm9908-201ENSMUST00000211534 448 ntBASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb8Q91XZ2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Gm13612-201ENSMUST00000119276 390 ntBASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Gm11918-201ENSMUST00000121660 179 ntBASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Gm6745-201ENSMUST00000199216 526 ntBASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb8Q91XZ2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms