Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ddx41Q91VN6 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Gm38002-201ENSMUST00000193255 180 ntBASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Gm37008-201ENSMUST00000195712 319 ntBASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Gm43179-201ENSMUST00000198797 275 ntBASIC14.85□□□□□ -0.03
Ddx41Q91VN6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx41Q91VN6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Olfr582-201ENSMUST00000098212 960 ntBASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx41Q91VN6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx41Q91VN6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ddx41Q91VN6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.83□□□□□ -0.03
Ddx41Q91VN6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx41Q91VN6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx41Q91VN6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ddx41Q91VN6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Gm8805-201ENSMUST00000117848 313 ntBASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms