Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm27618-201ENSMUST00000183671 60 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm27430-201ENSMUST00000184585 107 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm44333-201ENSMUST00000197168 107 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 AW822252-206ENSMUST00000208904 237 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm6888-201ENSMUST00000221983 706 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Gm43094-201ENSMUST00000196549 921 ntBASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Chchd1-203ENSMUST00000224633 557 ntBASIC10.53□□□□□ -0.72
Nup35Q8R4R6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nup35Q8R4R6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
Nup35Q8R4R6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
Nup35Q8R4R6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nup35Q8R4R6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nup35Q8R4R6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.52□□□□□ -0.72
Nup35Q8R4R6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Nup35Q8R4R6 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.52□□□□□ -0.72
Nup35Q8R4R6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nup35Q8R4R6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nup35Q8R4R6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nup35Q8R4R6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nup35Q8R4R6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Gm26464-201ENSMUST00000157094 305 ntBASIC10.52□□□□□ -0.73
Nup35Q8R4R6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Gm38294-201ENSMUST00000192831 381 ntBASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms