Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdt1Q8R4E9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdt1Q8R4E9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm15808-201ENSMUST00000119046 604 ntBASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdt1Q8R4E9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Gm22018-201ENSMUST00000104357 131 ntBASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Proscos-202ENSMUST00000178990 666 ntBASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.55□□□□□ -0.4
Cdt1Q8R4E9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Mir877-201ENSMUST00000104738 85 ntBASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms