Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Gm13453-201ENSMUST00000118708 357 ntBASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Gm22175-201ENSMUST00000175007 78 ntBASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Gm7775-201ENSMUST00000218871 853 ntBASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nudcd3Q8R1N4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Gm2756-201ENSMUST00000195851 400 ntBASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Gm8396-201ENSMUST00000057361 823 ntBASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms