Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Gm8463-201ENSMUST00000208573 613 ntBASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cchcr1Q8K2I2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Gm13813-201ENSMUST00000120998 787 ntBASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Gm12291-201ENSMUST00000121627 311 ntBASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Gm28693-202ENSMUST00000190758 331 ntBASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cchcr1Q8K2I2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
Cchcr1Q8K2I2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gm18018-201ENSMUST00000198273 408 ntBASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cchcr1Q8K2I2 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms