Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.22□□□□□ -0.29
CopaQ8CIE6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.22□□□□□ -0.29
CopaQ8CIE6 Gm12384-201ENSMUST00000119228 919 ntBASIC13.22□□□□□ -0.29
CopaQ8CIE6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Mir6420-201ENSMUST00000185032 102 ntBASIC13.22□□□□□ -0.29
CopaQ8CIE6 Gm43818-201ENSMUST00000200605 466 ntBASIC13.22□□□□□ -0.29
CopaQ8CIE6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.22□□□□□ -0.29
CopaQ8CIE6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopaQ8CIE6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.21□□□□□ -0.29
CopaQ8CIE6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.21□□□□□ -0.29
CopaQ8CIE6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.21□□□□□ -0.29
CopaQ8CIE6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Gm45331-201ENSMUST00000209868 554 ntBASIC13.21□□□□□ -0.29
CopaQ8CIE6 Gm29705-201ENSMUST00000212598 474 ntBASIC13.21□□□□□ -0.29
CopaQ8CIE6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.21□□□□□ -0.29
CopaQ8CIE6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopaQ8CIE6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CopaQ8CIE6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopaQ8CIE6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CopaQ8CIE6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopaQ8CIE6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CopaQ8CIE6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CopaQ8CIE6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopaQ8CIE6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopaQ8CIE6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopaQ8CIE6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopaQ8CIE6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.21□□□□□ -0.3
CopaQ8CIE6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.2□□□□□ -0.3
CopaQ8CIE6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm12203-201ENSMUST00000118235 598 ntBASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm12209-201ENSMUST00000120089 596 ntBASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.2□□□□□ -0.3
CopaQ8CIE6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.2□□□□□ -0.3
CopaQ8CIE6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.2□□□□□ -0.3
CopaQ8CIE6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.2□□□□□ -0.3
CopaQ8CIE6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms