Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Gm23363-201ENSMUST00000175024 79 ntBASIC12.61□□□□□ -0.39
Rab43Q8CG50 Gm2546-201ENSMUST00000182630 991 ntBASIC12.61□□□□□ -0.39
Rab43Q8CG50 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.61□□□□□ -0.39
Rab43Q8CG50 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.61□□□□□ -0.39
Rab43Q8CG50 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.61□□□□□ -0.39
Rab43Q8CG50 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.61□□□□□ -0.39
Rab43Q8CG50 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.6□□□□□ -0.39
Rab43Q8CG50 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.6□□□□□ -0.39
Rab43Q8CG50 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.6□□□□□ -0.39
Rab43Q8CG50 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab43Q8CG50 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rab43Q8CG50 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab43Q8CG50 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms