Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc38Q8CDN8 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.4□□□□□ -0.11
Ccdc38Q8CDN8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Gm27701-201ENSMUST00000184498 110 ntBASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Gm10576-201ENSMUST00000191927 825 ntBASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Map1b-203ENSMUST00000223725 2669 ntBASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc38Q8CDN8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Gm16372-201ENSMUST00000073088 450 ntBASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms