Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Gm12341-201ENSMUST00000119724 503 ntBASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Gm12490-201ENSMUST00000120255 560 ntBASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Gm9908-201ENSMUST00000211534 448 ntBASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Gm7653-201ENSMUST00000214567 508 ntBASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc87Q8CDL9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc87Q8CDL9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc87Q8CDL9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Ccdc87Q8CDL9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc87Q8CDL9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc87Q8CDL9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc87Q8CDL9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms