Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pabpn1Q8CCS6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gm18198-201ENSMUST00000204986 1551 ntBASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gm9797-202ENSMUST00000218003 294 ntBASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 AC130477.1-201ENSMUST00000226982 420 ntBASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gm38391-201ENSMUST00000191720 4069 ntBASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pabpn1Q8CCS6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gm43447-201ENSMUST00000198471 1535 ntBASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gm11560-201ENSMUST00000117567 948 ntBASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gm29499-201ENSMUST00000189151 486 ntBASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gm28329-201ENSMUST00000191208 689 ntBASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gm29171-201ENSMUST00000191397 486 ntBASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pabpn1Q8CCS6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Gm24934-201ENSMUST00000103764 111 ntBASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Gm12419-201ENSMUST00000116649 636 ntBASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Gm11511-201ENSMUST00000118146 540 ntBASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Gm17796-201ENSMUST00000189015 1213 ntBASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Gm18304-201ENSMUST00000189162 546 ntBASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Gm9136-201ENSMUST00000193368 454 ntBASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms