Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Usp44Q8C2S0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Usp44Q8C2S0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Usp44Q8C2S0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Usp44Q8C2S0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Usp44Q8C2S0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Usp44Q8C2S0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Usp44Q8C2S0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Usp44Q8C2S0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Usp44Q8C2S0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Usp44Q8C2S0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Usp44Q8C2S0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.08■□□□□ 0
Usp44Q8C2S0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.08■□□□□ 0
Usp44Q8C2S0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.08■□□□□ 0
Usp44Q8C2S0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Usp44Q8C2S0 Gm15703-201ENSMUST00000120250 880 ntBASIC15.08■□□□□ 0
Usp44Q8C2S0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.08■□□□□ 0
Usp44Q8C2S0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Mir7085-201ENSMUST00000184353 66 ntBASIC15.08■□□□□ 0
Usp44Q8C2S0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.08■□□□□ 0
Usp44Q8C2S0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.08■□□□□ 0
Usp44Q8C2S0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Usp44Q8C2S0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms