Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sh3rf3Q8C120 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Mir686-201ENSMUST00000102174 109 ntBASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Sh3rf3Q8C120 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sh3rf3Q8C120 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gm8213-201ENSMUST00000118191 441 ntBASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gm24196-201ENSMUST00000179161 110 ntBASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gm43438-201ENSMUST00000198133 379 ntBASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms