Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm11478-201ENSMUST00000117851 599 ntBASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm24644-201ENSMUST00000157114 139 ntBASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm27847-201ENSMUST00000183711 107 ntBASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm27375-201ENSMUST00000183799 107 ntBASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm7561-201ENSMUST00000211203 886 ntBASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm29705-201ENSMUST00000212598 474 ntBASIC13.32□□□□□ -0.28
Trub1Q8C0D0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trub1Q8C0D0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Gm37042-201ENSMUST00000193816 581 ntBASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Mir339-201ENSMUST00000083659 96 ntBASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Gm6091-201ENSMUST00000098307 165 ntBASIC13.31□□□□□ -0.28
Trub1Q8C0D0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trub1Q8C0D0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms