Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Gm9794-201ENSMUST00000202370 423 ntBASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Gm45384-201ENSMUST00000210451 277 ntBASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn3Q8BHH8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Gm7287-201ENSMUST00000205267 602 ntBASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn3Q8BHH8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms