Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gm13365-201ENSMUST00000121188 973 ntBASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gm46209-201ENSMUST00000217912 553 ntBASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Gm27494-201ENSMUST00000184735 189 ntBASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Mzt1-203ENSMUST00000227948 952 ntBASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Gm24447-201ENSMUST00000083977 338 ntBASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc5a7Q8BGY9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms