Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smim12Q78RX3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Smim12Q78RX3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Smim12Q78RX3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smim12Q78RX3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Smim12Q78RX3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Smim12Q78RX3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Smim12Q78RX3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Smim12Q78RX3 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.89□□□□□ -0.67
Smim12Q78RX3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gm5687-201ENSMUST00000118252 640 ntBASIC10.89□□□□□ -0.67
Smim12Q78RX3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gm13813-201ENSMUST00000120998 787 ntBASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gm14719-201ENSMUST00000121891 340 ntBASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gm44397-201ENSMUST00000195950 113 ntBASIC10.89□□□□□ -0.67
Smim12Q78RX3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.89□□□□□ -0.67
Smim12Q78RX3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smim12Q78RX3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Gm12291-201ENSMUST00000121627 311 ntBASIC10.88□□□□□ -0.67
Smim12Q78RX3 Gm15487-201ENSMUST00000122373 465 ntBASIC10.88□□□□□ -0.67
Smim12Q78RX3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Gm9630-201ENSMUST00000178304 885 ntBASIC10.88□□□□□ -0.67
Smim12Q78RX3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Gm27989-201ENSMUST00000184721 107 ntBASIC10.88□□□□□ -0.67
Smim12Q78RX3 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.88□□□□□ -0.67
Smim12Q78RX3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms