Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Gm26035-201ENSMUST00000083065 308 ntBASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rad54bQ6PFE3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Gm5780-201ENSMUST00000217774 1834 ntBASIC13□□□□□ -0.33
Rad54bQ6PFE3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Gm18916-201ENSMUST00000198264 1246 ntBASIC13□□□□□ -0.33
Rad54bQ6PFE3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Rad54bQ6PFE3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rad54bQ6PFE3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Gm9630-201ENSMUST00000178304 885 ntBASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Gm18624-201ENSMUST00000220966 658 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms