Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gm24749-201ENSMUST00000157838 343 ntBASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gm27552-201ENSMUST00000183351 62 ntBASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gm27844-201ENSMUST00000183613 62 ntBASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gm9550-201ENSMUST00000161130 862 ntBASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gm5070-201ENSMUST00000177599 862 ntBASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gm7003-201ENSMUST00000195089 312 ntBASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Snrnp40Q6PE01 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Snrnp40Q6PE01 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Snrnp40Q6PE01 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms