Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcc2Q6PDG5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Smarcc2Q6PDG5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Smarcc2Q6PDG5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcc2Q6PDG5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcc2Q6PDG5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
Smarcc2Q6PDG5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcc2Q6PDG5 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcc2Q6PDG5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcc2Q6PDG5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Gm13226-201ENSMUST00000117838 404 ntBASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Gm27331-201ENSMUST00000183705 60 ntBASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Gm29705-201ENSMUST00000212598 474 ntBASIC15.08■□□□□ 0
Smarcc2Q6PDG5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcc2Q6PDG5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.08■□□□□ 0
Smarcc2Q6PDG5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm11618-201ENSMUST00000117946 267 ntBASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm27731-201ENSMUST00000185192 107 ntBASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm45784-201ENSMUST00000188360 142 ntBASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm28693-202ENSMUST00000190758 331 ntBASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm40466-201ENSMUST00000212174 422 ntBASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcc2Q6PDG5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms