Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SspnQ62147 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.86□□□□□ -0.67
SspnQ62147 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
SspnQ62147 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.86□□□□□ -0.67
SspnQ62147 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SspnQ62147 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.86□□□□□ -0.67
SspnQ62147 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.86□□□□□ -0.67
SspnQ62147 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SspnQ62147 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SspnQ62147 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.86□□□□□ -0.67
SspnQ62147 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.86□□□□□ -0.67
SspnQ62147 Gm38223-201ENSMUST00000194484 695 ntBASIC10.86□□□□□ -0.67
SspnQ62147 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.86□□□□□ -0.67
SspnQ62147 Gm19931-201ENSMUST00000198920 368 ntBASIC10.86□□□□□ -0.67
SspnQ62147 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.86□□□□□ -0.67
SspnQ62147 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.86□□□□□ -0.67
SspnQ62147 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.86□□□□□ -0.67
SspnQ62147 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.86□□□□□ -0.67
SspnQ62147 Gm26315-201ENSMUST00000083890 321 ntBASIC10.86□□□□□ -0.67
SspnQ62147 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.86□□□□□ -0.67
SspnQ62147 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SspnQ62147 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.86□□□□□ -0.67
SspnQ62147 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
SspnQ62147 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SspnQ62147 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SspnQ62147 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.85□□□□□ -0.67
SspnQ62147 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SspnQ62147 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.85□□□□□ -0.67
SspnQ62147 Gm15371-201ENSMUST00000117057 784 ntBASIC10.85□□□□□ -0.67
SspnQ62147 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.85□□□□□ -0.67
SspnQ62147 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SspnQ62147 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.85□□□□□ -0.67
SspnQ62147 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.85□□□□□ -0.67
SspnQ62147 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.85□□□□□ -0.67
SspnQ62147 Gm10576-201ENSMUST00000191927 825 ntBASIC10.85□□□□□ -0.67
SspnQ62147 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
SspnQ62147 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.85□□□□□ -0.67
SspnQ62147 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SspnQ62147 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SspnQ62147 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SspnQ62147 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SspnQ62147 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms