Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ClpbQ60649 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
ClpbQ60649 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.43□□□□□ -0.42
ClpbQ60649 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ClpbQ60649 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.42□□□□□ -0.42
ClpbQ60649 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
ClpbQ60649 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.42□□□□□ -0.42
ClpbQ60649 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.42□□□□□ -0.42
ClpbQ60649 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.42□□□□□ -0.42
ClpbQ60649 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.42□□□□□ -0.42
ClpbQ60649 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ClpbQ60649 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ClpbQ60649 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ClpbQ60649 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.42□□□□□ -0.42
ClpbQ60649 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClpbQ60649 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ClpbQ60649 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.41□□□□□ -0.42
ClpbQ60649 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.41□□□□□ -0.42
ClpbQ60649 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.41□□□□□ -0.42
ClpbQ60649 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Mir7085-201ENSMUST00000184353 66 ntBASIC12.41□□□□□ -0.42
ClpbQ60649 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Gm45784-201ENSMUST00000188360 142 ntBASIC12.41□□□□□ -0.42
ClpbQ60649 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 AY702102-202ENSMUST00000194651 1173 ntBASIC12.41□□□□□ -0.42
ClpbQ60649 Gm19931-201ENSMUST00000198920 368 ntBASIC12.41□□□□□ -0.42
ClpbQ60649 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.41□□□□□ -0.42
ClpbQ60649 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.41□□□□□ -0.42
ClpbQ60649 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.41□□□□□ -0.42
ClpbQ60649 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.41□□□□□ -0.42
ClpbQ60649 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClpbQ60649 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.41□□□□□ -0.42
ClpbQ60649 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms