Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm44124-201ENSMUST00000204159 472 ntBASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm5779-201ENSMUST00000218467 910 ntBASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm7774-201ENSMUST00000200064 533 ntBASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms