Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Mmp25Q3U435 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.17□□□□□ -0.46
Mmp25Q3U435 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp25Q3U435 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.17□□□□□ -0.46
Mmp25Q3U435 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp25Q3U435 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp25Q3U435 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp25Q3U435 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mmp25Q3U435 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.16□□□□□ -0.46
Mmp25Q3U435 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm23931-201ENSMUST00000103842 109 ntBASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm5187-201ENSMUST00000117317 991 ntBASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm8062-201ENSMUST00000139696 444 ntBASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.16□□□□□ -0.46
Mmp25Q3U435 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm32025-201ENSMUST00000217960 307 ntBASIC12.16□□□□□ -0.46
Mmp25Q3U435 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.16□□□□□ -0.46
Mmp25Q3U435 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp25Q3U435 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.15□□□□□ -0.46
Mmp25Q3U435 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.15□□□□□ -0.46
Mmp25Q3U435 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.15□□□□□ -0.46
Mmp25Q3U435 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.15□□□□□ -0.46
Mmp25Q3U435 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp25Q3U435 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp25Q3U435 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp25Q3U435 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp25Q3U435 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp25Q3U435 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp25Q3U435 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp25Q3U435 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms