Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Gm28693-202ENSMUST00000190758 331 ntBASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Gm2495-201ENSMUST00000191160 466 ntBASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Gm6458-201ENSMUST00000211573 635 ntBASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cul4aQ3TCH7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Gm18624-201ENSMUST00000220966 658 ntBASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cul4aQ3TCH7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cul4aQ3TCH7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.53□□□□□ -0.24
Cul4aQ3TCH7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms