Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.01□□□□□ -0.33
Pfdn6Q03958 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.01□□□□□ -0.33
Pfdn6Q03958 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Gm38671-201ENSMUST00000200573 130 ntBASIC13.01□□□□□ -0.33
Pfdn6Q03958 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.01□□□□□ -0.33
Pfdn6Q03958 Gm44069-201ENSMUST00000204898 506 ntBASIC13.01□□□□□ -0.33
Pfdn6Q03958 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.01□□□□□ -0.33
Pfdn6Q03958 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pfdn6Q03958 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Pfdn6Q03958 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pfdn6Q03958 Gm11918-201ENSMUST00000121660 179 ntBASIC13□□□□□ -0.33
Pfdn6Q03958 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13□□□□□ -0.33
Pfdn6Q03958 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13□□□□□ -0.33
Pfdn6Q03958 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pfdn6Q03958 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13□□□□□ -0.33
Pfdn6Q03958 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Gm6458-201ENSMUST00000211573 635 ntBASIC13□□□□□ -0.33
Pfdn6Q03958 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13□□□□□ -0.33
Pfdn6Q03958 AC154239.3-201ENSMUST00000226933 674 ntBASIC13□□□□□ -0.33
Pfdn6Q03958 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pfdn6Q03958 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13□□□□□ -0.33
Pfdn6Q03958 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13□□□□□ -0.33
Pfdn6Q03958 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13□□□□□ -0.33
Pfdn6Q03958 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pfdn6Q03958 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pfdn6Q03958 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Pfdn6Q03958 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn6Q03958 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms