Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Msx3P70354 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msx3P70354 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.28□□□□□ -0.28
Msx3P70354 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Gm6745-201ENSMUST00000199216 526 ntBASIC13.28□□□□□ -0.28
Msx3P70354 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.28□□□□□ -0.28
Msx3P70354 Gm9908-201ENSMUST00000211534 448 ntBASIC13.28□□□□□ -0.28
Msx3P70354 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.28□□□□□ -0.28
Msx3P70354 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.28□□□□□ -0.28
Msx3P70354 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Msx3P70354 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.28□□□□□ -0.28
Msx3P70354 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Msx3P70354 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Msx3P70354 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Msx3P70354 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.28□□□□□ -0.28
Msx3P70354 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Msx3P70354 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Msx3P70354 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msx3P70354 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msx3P70354 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msx3P70354 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msx3P70354 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Msx3P70354 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Msx3P70354 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msx3P70354 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msx3P70354 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Msx3P70354 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.27□□□□□ -0.28
Msx3P70354 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Msx3P70354 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msx3P70354 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.27□□□□□ -0.28
Msx3P70354 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msx3P70354 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.27□□□□□ -0.29
Msx3P70354 Gm14928-201ENSMUST00000120198 477 ntBASIC13.27□□□□□ -0.29
Msx3P70354 Gm13123-201ENSMUST00000122173 492 ntBASIC13.27□□□□□ -0.29
Msx3P70354 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Gm17794-201ENSMUST00000220252 955 ntBASIC13.27□□□□□ -0.29
Msx3P70354 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.27□□□□□ -0.29
Msx3P70354 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.27□□□□□ -0.29
Msx3P70354 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Msx3P70354 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.27□□□□□ -0.29
Msx3P70354 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.27□□□□□ -0.29
Msx3P70354 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msx3P70354 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.26□□□□□ -0.29
Msx3P70354 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.26□□□□□ -0.29
Msx3P70354 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms