Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm21092-201ENSMUST00000178995 955 ntBASIC20.71■□□□□ 0.91
Cux2P70298 Gm5621-201ENSMUST00000187303 640 ntBASIC20.71■□□□□ 0.91
Cux2P70298 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC20.71■□□□□ 0.91
Cux2P70298 Gm3619-201ENSMUST00000219947 775 ntBASIC20.71■□□□□ 0.91
Cux2P70298 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC20.71■□□□□ 0.91
Cux2P70298 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cux2P70298 Gm25201-201ENSMUST00000083093 170 ntBASIC20.71■□□□□ 0.91
Cux2P70298 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Cux2P70298 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC20.71■□□□□ 0.91
Cux2P70298 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Cux2P70298 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cux2P70298 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Cux2P70298 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC20.7■□□□□ 0.9
Cux2P70298 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC20.7■□□□□ 0.9
Cux2P70298 Gm8737-201ENSMUST00000122208 642 ntBASIC20.7■□□□□ 0.9
Cux2P70298 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC20.7■□□□□ 0.9
Cux2P70298 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cux2P70298 AC169036.1-201ENSMUST00000227994 296 ntBASIC20.7■□□□□ 0.9
Cux2P70298 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cux2P70298 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cux2P70298 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC20.7■□□□□ 0.9
Cux2P70298 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cux2P70298 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Cux2P70298 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC20.7■□□□□ 0.9
Cux2P70298 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Mir874-201ENSMUST00000104769 76 ntBASIC20.7■□□□□ 0.9
Cux2P70298 Gm13916-201ENSMUST00000117368 628 ntBASIC20.7■□□□□ 0.9
Cux2P70298 Gm15725-201ENSMUST00000119947 1090 ntBASIC20.7■□□□□ 0.9
Cux2P70298 Gm13263-201ENSMUST00000121271 838 ntBASIC20.7■□□□□ 0.9
Cux2P70298 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cux2P70298 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC20.7■□□□□ 0.9
Cux2P70298 Gm44958-201ENSMUST00000203734 736 ntBASIC20.7■□□□□ 0.9
Cux2P70298 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cux2P70298 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Cux2P70298 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Cux2P70298 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.69■□□□□ 0.9
Cux2P70298 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cux2P70298 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC20.69■□□□□ 0.9
Cux2P70298 Mir6923-201ENSMUST00000184592 72 ntBASIC20.69■□□□□ 0.9
Cux2P70298 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC20.69■□□□□ 0.9
Cux2P70298 Gm5100-201ENSMUST00000195631 589 ntBASIC20.69■□□□□ 0.9
Cux2P70298 Gm9645-201ENSMUST00000197131 792 ntBASIC20.69■□□□□ 0.9
Cux2P70298 Gm42629-201ENSMUST00000199063 1102 ntBASIC20.69■□□□□ 0.9
Cux2P70298 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cux2P70298 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC20.68■□□□□ 0.9
Cux2P70298 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cux2P70298 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Cux2P70298 n-R5s64-201ENSMUST00000102019 119 ntBASIC20.68■□□□□ 0.9
Cux2P70298 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC20.68■□□□□ 0.9
Cux2P70298 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Cux2P70298 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cux2P70298 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Cux2P70298 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cux2P70298 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC20.68■□□□□ 0.9
Cux2P70298 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms