Protein–RNA interactions for Protein: P70255

Nfic, Nuclear factor 1 C-type, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NficP70255 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
NficP70255 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NficP70255 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NficP70255 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NficP70255 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NficP70255 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NficP70255 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NficP70255 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
NficP70255 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.74□□□□□ -0.37
NficP70255 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NficP70255 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.74□□□□□ -0.37
NficP70255 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.74□□□□□ -0.37
NficP70255 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
NficP70255 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.74□□□□□ -0.37
NficP70255 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.74□□□□□ -0.37
NficP70255 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.74□□□□□ -0.37
NficP70255 Gm8463-201ENSMUST00000208573 613 ntBASIC12.74□□□□□ -0.37
NficP70255 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.74□□□□□ -0.37
NficP70255 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.74□□□□□ -0.37
NficP70255 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.74□□□□□ -0.37
NficP70255 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
NficP70255 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.74□□□□□ -0.37
NficP70255 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NficP70255 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
NficP70255 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.73□□□□□ -0.37
NficP70255 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NficP70255 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.73□□□□□ -0.37
NficP70255 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.73□□□□□ -0.37
NficP70255 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.73□□□□□ -0.37
NficP70255 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NficP70255 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
NficP70255 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NficP70255 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NficP70255 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.73□□□□□ -0.37
NficP70255 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.73□□□□□ -0.37
NficP70255 Gm6745-201ENSMUST00000199216 526 ntBASIC12.73□□□□□ -0.37
NficP70255 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.73□□□□□ -0.37
NficP70255 Gm9908-201ENSMUST00000211534 448 ntBASIC12.73□□□□□ -0.37
NficP70255 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NficP70255 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NficP70255 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NficP70255 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NficP70255 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NficP70255 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NficP70255 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.72□□□□□ -0.37
NficP70255 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NficP70255 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.72□□□□□ -0.37
NficP70255 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NficP70255 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NficP70255 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.72□□□□□ -0.37
NficP70255 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NficP70255 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NficP70255 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NficP70255 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.72□□□□□ -0.37
NficP70255 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NficP70255 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.72□□□□□ -0.37
NficP70255 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.72□□□□□ -0.37
NficP70255 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.72□□□□□ -0.37
NficP70255 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NficP70255 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms