Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Lrch1P62046 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.18■□□□□ 0.02
Lrch1P62046 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.18■□□□□ 0.02
Lrch1P62046 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lrch1P62046 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Lrch1P62046 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Lrch1P62046 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.17■□□□□ 0.02
Lrch1P62046 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.17■□□□□ 0.02
Lrch1P62046 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Lrch1P62046 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Lrch1P62046 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lrch1P62046 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Lrch1P62046 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.17■□□□□ 0.02
Lrch1P62046 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Lrch1P62046 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.17■□□□□ 0.02
Lrch1P62046 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Gm15515-201ENSMUST00000117827 822 ntBASIC15.17■□□□□ 0.02
Lrch1P62046 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Gm27627-201ENSMUST00000183644 150 ntBASIC15.17■□□□□ 0.02
Lrch1P62046 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Gm28882-201ENSMUST00000185504 314 ntBASIC15.17■□□□□ 0.02
Lrch1P62046 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.17■□□□□ 0.02
Lrch1P62046 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Lrch1P62046 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.17■□□□□ 0.02
Lrch1P62046 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lrch1P62046 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.17■□□□□ 0.02
Lrch1P62046 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Lrch1P62046 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lrch1P62046 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.17■□□□□ 0.02
Lrch1P62046 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Lrch1P62046 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lrch1P62046 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lrch1P62046 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Lrch1P62046 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lrch1P62046 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Gm14644-201ENSMUST00000116671 647 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Gm14921-201ENSMUST00000118643 908 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Gm13888-201ENSMUST00000119148 422 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Gm12029-201ENSMUST00000120073 832 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Gm5616-201ENSMUST00000165252 384 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.16■□□□□ 0.02
Lrch1P62046 Gm8741-201ENSMUST00000174736 384 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.16■□□□□ 0.02
Lrch1P62046 Mir6958-201ENSMUST00000184207 73 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.16■□□□□ 0.02
Lrch1P62046 Gm43916-201ENSMUST00000205062 967 ntBASIC15.16■□□□□ 0.02
Lrch1P62046 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lrch1P62046 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Lrch1P62046 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms