Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lim2P56563 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lim2P56563 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.93□□□□□ -0.34
Lim2P56563 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Lim2P56563 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.93□□□□□ -0.34
Lim2P56563 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Gm7029-201ENSMUST00000173226 450 ntBASIC12.93□□□□□ -0.34
Lim2P56563 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.93□□□□□ -0.34
Lim2P56563 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.93□□□□□ -0.34
Lim2P56563 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.93□□□□□ -0.34
Lim2P56563 Gm10268-201ENSMUST00000085340 555 ntBASIC12.93□□□□□ -0.34
Lim2P56563 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lim2P56563 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lim2P56563 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.93□□□□□ -0.34
Lim2P56563 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lim2P56563 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.92□□□□□ -0.34
Lim2P56563 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.92□□□□□ -0.34
Lim2P56563 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.92□□□□□ -0.34
Lim2P56563 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.92□□□□□ -0.34
Lim2P56563 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.92□□□□□ -0.34
Lim2P56563 Snora78-201ENSMUST00000158630 128 ntBASIC12.92□□□□□ -0.34
Lim2P56563 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.92□□□□□ -0.34
Lim2P56563 Gm26927-201ENSMUST00000182385 965 ntBASIC12.92□□□□□ -0.34
Lim2P56563 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.92□□□□□ -0.34
Lim2P56563 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lim2P56563 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.92□□□□□ -0.34
Lim2P56563 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.92□□□□□ -0.34
Lim2P56563 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Lim2P56563 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Lim2P56563 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.92□□□□□ -0.34
Lim2P56563 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lim2P56563 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.92□□□□□ -0.34
Lim2P56563 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lim2P56563 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.91□□□□□ -0.34
Lim2P56563 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.91□□□□□ -0.34
Lim2P56563 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.91□□□□□ -0.34
Lim2P56563 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lim2P56563 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lim2P56563 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.91□□□□□ -0.34
Lim2P56563 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lim2P56563 Gm11637-201ENSMUST00000120601 592 ntBASIC12.91□□□□□ -0.34
Lim2P56563 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.91□□□□□ -0.34
Lim2P56563 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.91□□□□□ -0.34
Lim2P56563 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Gm26185-201ENSMUST00000157692 266 ntBASIC12.91□□□□□ -0.34
Lim2P56563 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms