Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.95□□□□□ -0.18
Nub1P54729 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nub1P54729 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nub1P54729 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nub1P54729 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nub1P54729 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.95□□□□□ -0.18
Nub1P54729 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nub1P54729 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nub1P54729 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nub1P54729 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.95□□□□□ -0.18
Nub1P54729 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nub1P54729 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.95□□□□□ -0.18
Nub1P54729 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.95□□□□□ -0.18
Nub1P54729 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.94□□□□□ -0.18
Nub1P54729 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.94□□□□□ -0.18
Nub1P54729 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Nub1P54729 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.94□□□□□ -0.18
Nub1P54729 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.94□□□□□ -0.18
Nub1P54729 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Gm29127-201ENSMUST00000188304 517 ntBASIC13.94□□□□□ -0.18
Nub1P54729 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.94□□□□□ -0.18
Nub1P54729 Gm6266-201ENSMUST00000203844 806 ntBASIC13.94□□□□□ -0.18
Nub1P54729 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.94□□□□□ -0.18
Nub1P54729 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.94□□□□□ -0.18
Nub1P54729 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nub1P54729 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.94□□□□□ -0.18
Nub1P54729 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nub1P54729 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.94□□□□□ -0.18
Nub1P54729 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nub1P54729 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nub1P54729 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.94□□□□□ -0.18
Nub1P54729 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nub1P54729 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.93□□□□□ -0.18
Nub1P54729 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.93□□□□□ -0.18
Nub1P54729 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nub1P54729 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nub1P54729 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.93□□□□□ -0.18
Nub1P54729 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Gm4984-201ENSMUST00000115987 360 ntBASIC13.93□□□□□ -0.18
Nub1P54729 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nub1P54729 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.93□□□□□ -0.18
Nub1P54729 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.93□□□□□ -0.18
Nub1P54729 Gm18187-201ENSMUST00000196476 984 ntBASIC13.93□□□□□ -0.18
Nub1P54729 Gm10146-201ENSMUST00000072739 309 ntBASIC13.93□□□□□ -0.18
Nub1P54729 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nub1P54729 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.93□□□□□ -0.18
Nub1P54729 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.93□□□□□ -0.18
Nub1P54729 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nub1P54729 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.93□□□□□ -0.18
Nub1P54729 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nub1P54729 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.92□□□□□ -0.18
Nub1P54729 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nub1P54729 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nub1P54729 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nub1P54729 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.92□□□□□ -0.18
Nub1P54729 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nub1P54729 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nub1P54729 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nub1P54729 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nub1P54729 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms