Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm11930-201ENSMUST00000117788 190 ntBASIC15.23■□□□□ 0.03
LtbrP50284 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.23■□□□□ 0.03
LtbrP50284 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LtbrP50284 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LtbrP50284 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LtbrP50284 Gm26361-201ENSMUST00000158868 186 ntBASIC15.23■□□□□ 0.03
LtbrP50284 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.23■□□□□ 0.03
LtbrP50284 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Gm45770-201ENSMUST00000212105 616 ntBASIC15.23■□□□□ 0.03
LtbrP50284 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.23■□□□□ 0.03
LtbrP50284 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
LtbrP50284 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.23■□□□□ 0.03
LtbrP50284 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.23■□□□□ 0.03
LtbrP50284 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LtbrP50284 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.23■□□□□ 0.03
LtbrP50284 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.23■□□□□ 0.03
LtbrP50284 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LtbrP50284 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.22■□□□□ 0.03
LtbrP50284 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
LtbrP50284 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.22■□□□□ 0.03
LtbrP50284 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Gm14740-201ENSMUST00000118538 1150 ntBASIC15.22■□□□□ 0.03
LtbrP50284 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Gm5950-201ENSMUST00000213337 772 ntBASIC15.22■□□□□ 0.03
LtbrP50284 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LtbrP50284 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.22■□□□□ 0.03
LtbrP50284 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.22■□□□□ 0.03
LtbrP50284 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LtbrP50284 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
LtbrP50284 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Gm42651-201ENSMUST00000199851 1339 ntBASIC15.21■□□□□ 0.03
LtbrP50284 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.21■□□□□ 0.03
LtbrP50284 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.21■□□□□ 0.03
LtbrP50284 Gm25509-201ENSMUST00000116985 106 ntBASIC15.21■□□□□ 0.03
LtbrP50284 Gm13611-201ENSMUST00000118269 318 ntBASIC15.21■□□□□ 0.03
LtbrP50284 Gm14665-201ENSMUST00000122294 557 ntBASIC15.21■□□□□ 0.03
LtbrP50284 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LtbrP50284 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LtbrP50284 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC15.21■□□□□ 0.03
LtbrP50284 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.21■□□□□ 0.03
LtbrP50284 Gm18377-201ENSMUST00000215141 607 ntBASIC15.21■□□□□ 0.03
LtbrP50284 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.21■□□□□ 0.03
LtbrP50284 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.21■□□□□ 0.03
LtbrP50284 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.21■□□□□ 0.03
LtbrP50284 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LtbrP50284 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LtbrP50284 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LtbrP50284 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.21■□□□□ 0.02
LtbrP50284 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LtbrP50284 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LtbrP50284 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LtbrP50284 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LtbrP50284 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LtbrP50284 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LtbrP50284 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
LtbrP50284 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LtbrP50284 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LtbrP50284 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LtbrP50284 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LtbrP50284 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LtbrP50284 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms