Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.34□□□□□ -0.27
HttP42859 Trav11n-201ENSMUST00000200113 343 ntBASIC13.34□□□□□ -0.27
HttP42859 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.34□□□□□ -0.27
HttP42859 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Gm6170-201ENSMUST00000187672 1388 ntBASIC13.34□□□□□ -0.27
HttP42859 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.34□□□□□ -0.27
HttP42859 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Gm12579-201ENSMUST00000118040 783 ntBASIC13.34□□□□□ -0.27
HttP42859 Gm23675-201ENSMUST00000157311 125 ntBASIC13.34□□□□□ -0.27
HttP42859 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.34□□□□□ -0.27
HttP42859 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.34□□□□□ -0.27
HttP42859 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HttP42859 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
HttP42859 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HttP42859 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.33□□□□□ -0.27
HttP42859 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.33□□□□□ -0.27
HttP42859 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.33□□□□□ -0.28
HttP42859 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HttP42859 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.33□□□□□ -0.28
HttP42859 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HttP42859 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HttP42859 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HttP42859 Gm14213-201ENSMUST00000119778 768 ntBASIC13.33□□□□□ -0.28
HttP42859 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.33□□□□□ -0.28
HttP42859 Mir6941-201ENSMUST00000184711 59 ntBASIC13.33□□□□□ -0.28
HttP42859 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.33□□□□□ -0.28
HttP42859 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HttP42859 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.33□□□□□ -0.28
HttP42859 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.33□□□□□ -0.28
HttP42859 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.33□□□□□ -0.28
HttP42859 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.33□□□□□ -0.28
HttP42859 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.33□□□□□ -0.28
HttP42859 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Gm6390-201ENSMUST00000215034 589 ntBASIC13.33□□□□□ -0.28
HttP42859 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HttP42859 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.32□□□□□ -0.28
HttP42859 Gm26286-201ENSMUST00000104166 134 ntBASIC13.32□□□□□ -0.28
HttP42859 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.32□□□□□ -0.28
HttP42859 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.32□□□□□ -0.28
HttP42859 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.32□□□□□ -0.28
HttP42859 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.32□□□□□ -0.28
HttP42859 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.32□□□□□ -0.28
HttP42859 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HttP42859 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.32□□□□□ -0.28
HttP42859 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
HttP42859 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.32□□□□□ -0.28
HttP42859 Gm23255-201ENSMUST00000102244 110 ntBASIC13.32□□□□□ -0.28
HttP42859 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.32□□□□□ -0.28
HttP42859 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HttP42859 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 Gm18776-201ENSMUST00000188833 654 ntBASIC13.32□□□□□ -0.28
HttP42859 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.32□□□□□ -0.28
HttP42859 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.32□□□□□ -0.28
HttP42859 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.32□□□□□ -0.28
HttP42859 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HttP42859 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HttP42859 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
HttP42859 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HttP42859 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.31□□□□□ -0.28
HttP42859 Gm26368-201ENSMUST00000157826 118 ntBASIC13.31□□□□□ -0.28
HttP42859 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.31□□□□□ -0.28
HttP42859 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Gm18514-201ENSMUST00000218980 436 ntBASIC13.31□□□□□ -0.28
HttP42859 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.31□□□□□ -0.28
HttP42859 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.31□□□□□ -0.28
HttP42859 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms