Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.91□□□□□ -0.5
Nedd8P29595 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nedd8P29595 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.91□□□□□ -0.5
Nedd8P29595 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nedd8P29595 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.9□□□□□ -0.5
Nedd8P29595 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nedd8P29595 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Nedd8P29595 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.9□□□□□ -0.5
Nedd8P29595 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.9□□□□□ -0.5
Nedd8P29595 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Nedd8P29595 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.9□□□□□ -0.5
Nedd8P29595 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Gm38225-201ENSMUST00000194001 393 ntBASIC11.9□□□□□ -0.5
Nedd8P29595 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nedd8P29595 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.9□□□□□ -0.5
Nedd8P29595 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.9□□□□□ -0.5
Nedd8P29595 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.9□□□□□ -0.5
Nedd8P29595 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nedd8P29595 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.9□□□□□ -0.5
Nedd8P29595 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nedd8P29595 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nedd8P29595 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nedd8P29595 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nedd8P29595 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nedd8P29595 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nedd8P29595 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.89□□□□□ -0.51
Nedd8P29595 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nedd8P29595 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nedd8P29595 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.89□□□□□ -0.51
Nedd8P29595 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Nedd8P29595 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nedd8P29595 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.89□□□□□ -0.51
Nedd8P29595 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.89□□□□□ -0.51
Nedd8P29595 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.89□□□□□ -0.51
Nedd8P29595 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.89□□□□□ -0.51
Nedd8P29595 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nedd8P29595 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nedd8P29595 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Nedd8P29595 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.89□□□□□ -0.51
Nedd8P29595 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.89□□□□□ -0.51
Nedd8P29595 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.89□□□□□ -0.51
Nedd8P29595 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.89□□□□□ -0.51
Nedd8P29595 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nedd8P29595 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.89□□□□□ -0.51
Nedd8P29595 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Nedd8P29595 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nedd8P29595 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Nedd8P29595 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Nedd8P29595 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.89□□□□□ -0.51
Nedd8P29595 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nedd8P29595 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nedd8P29595 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms