Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gm16202-201ENSMUST00000117532 544 ntBASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gm2423-201ENSMUST00000074863 733 ntBASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tnfrsf1aP25118 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Tnfrsf1aP25118 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Tnfrsf1aP25118 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1aP25118 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Gm6458-201ENSMUST00000211573 635 ntBASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms