Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Cntn1P12960 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cntn1P12960 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.41□□□□□ -0.42
Cntn1P12960 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.41□□□□□ -0.42
Cntn1P12960 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Cntn1P12960 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.41□□□□□ -0.42
Cntn1P12960 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Gm7809-201ENSMUST00000153199 742 ntBASIC12.41□□□□□ -0.42
Cntn1P12960 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.41□□□□□ -0.42
Cntn1P12960 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.41□□□□□ -0.42
Cntn1P12960 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.41□□□□□ -0.42
Cntn1P12960 Gm43118-201ENSMUST00000199149 775 ntBASIC12.41□□□□□ -0.42
Cntn1P12960 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.41□□□□□ -0.42
Cntn1P12960 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.41□□□□□ -0.42
Cntn1P12960 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cntn1P12960 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cntn1P12960 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.41□□□□□ -0.42
Cntn1P12960 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cntn1P12960 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cntn1P12960 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Cntn1P12960 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Cntn1P12960 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Cntn1P12960 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.4□□□□□ -0.42
Cntn1P12960 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.4□□□□□ -0.42
Cntn1P12960 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.4□□□□□ -0.42
Cntn1P12960 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Cntn1P12960 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.4□□□□□ -0.42
Cntn1P12960 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.4□□□□□ -0.42
Cntn1P12960 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cntn1P12960 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.4□□□□□ -0.42
Cntn1P12960 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cntn1P12960 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cntn1P12960 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cntn1P12960 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cntn1P12960 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cntn1P12960 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Cntn1P12960 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cntn1P12960 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn1P12960 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn1P12960 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.39□□□□□ -0.43
Cntn1P12960 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.39□□□□□ -0.43
Cntn1P12960 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.39□□□□□ -0.43
Cntn1P12960 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.39□□□□□ -0.43
Cntn1P12960 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Gm11793-201ENSMUST00000120433 981 ntBASIC12.39□□□□□ -0.43
Cntn1P12960 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.39□□□□□ -0.43
Cntn1P12960 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn1P12960 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.39□□□□□ -0.43
Cntn1P12960 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn1P12960 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cntn1P12960 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Gm43179-201ENSMUST00000198797 275 ntBASIC12.39□□□□□ -0.43
Cntn1P12960 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn1P12960 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cntn1P12960 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms