Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ccl3P10855 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ccl3P10855 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccl3P10855 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.37□□□□□ -0.59
Ccl3P10855 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.37□□□□□ -0.59
Ccl3P10855 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Ccl3P10855 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ccl3P10855 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccl3P10855 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccl3P10855 Gm14999-201ENSMUST00000121039 624 ntBASIC11.37□□□□□ -0.59
Ccl3P10855 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.37□□□□□ -0.59
Ccl3P10855 Gm16296-201ENSMUST00000159905 325 ntBASIC11.37□□□□□ -0.59
Ccl3P10855 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccl3P10855 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.37□□□□□ -0.59
Ccl3P10855 Rprl1-202ENSMUST00000198476 238 ntBASIC11.37□□□□□ -0.59
Ccl3P10855 Gm43378-201ENSMUST00000199336 582 ntBASIC11.37□□□□□ -0.59
Ccl3P10855 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccl3P10855 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.37□□□□□ -0.59
Ccl3P10855 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ccl3P10855 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccl3P10855 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ccl3P10855 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccl3P10855 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Ccl3P10855 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.36□□□□□ -0.59
Ccl3P10855 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.36□□□□□ -0.59
Ccl3P10855 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Ccl3P10855 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Gm11331-201ENSMUST00000119764 288 ntBASIC11.36□□□□□ -0.59
Ccl3P10855 Gm14832-201ENSMUST00000121289 322 ntBASIC11.36□□□□□ -0.59
Ccl3P10855 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Gm24845-201ENSMUST00000158034 109 ntBASIC11.36□□□□□ -0.59
Ccl3P10855 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.36□□□□□ -0.59
Ccl3P10855 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.36□□□□□ -0.59
Ccl3P10855 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.36□□□□□ -0.59
Ccl3P10855 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms