Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp6P0C0A3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Mir874-201ENSMUST00000104769 76 ntBASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Gm22331-201ENSMUST00000158066 136 ntBASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Gm29649-201ENSMUST00000185649 419 ntBASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Gm6266-201ENSMUST00000203844 806 ntBASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp6P0C0A3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp6P0C0A3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp6P0C0A3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Gm12390-201ENSMUST00000117897 397 ntBASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Gm13829-201ENSMUST00000119600 138 ntBASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.08□□□□□ -0.16
Chmp6P0C0A3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Gm10012-201ENSMUST00000078252 192 ntBASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Chmp6P0C0A3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp6P0C0A3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.07□□□□□ -0.16
Chmp6P0C0A3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms