Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.18□□□□□ -0.78
Hoxd3P09027 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.18□□□□□ -0.78
Hoxd3P09027 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm24541-201ENSMUST00000103871 96 ntBASIC10.18□□□□□ -0.78
Hoxd3P09027 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm13123-201ENSMUST00000122173 492 ntBASIC10.18□□□□□ -0.78
Hoxd3P09027 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.18□□□□□ -0.78
Hoxd3P09027 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm27682-201ENSMUST00000183930 110 ntBASIC10.18□□□□□ -0.78
Hoxd3P09027 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Gm10268-201ENSMUST00000085340 555 ntBASIC10.18□□□□□ -0.78
Hoxd3P09027 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Hoxd3P09027 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxd3P09027 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.17□□□□□ -0.78
Hoxd3P09027 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxd3P09027 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxd3P09027 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
Hoxd3P09027 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm13392-201ENSMUST00000117708 150 ntBASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm15061-201ENSMUST00000121076 1046 ntBASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Hoxd3P09027 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm16112-201ENSMUST00000159075 382 ntBASIC10.17□□□□□ -0.78
Hoxd3P09027 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.17□□□□□ -0.78
Hoxd3P09027 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Hoxd3P09027 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.17□□□□□ -0.78
Hoxd3P09027 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.17□□□□□ -0.78
Hoxd3P09027 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Hoxd3P09027 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hoxd3P09027 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.17□□□□□ -0.78
Hoxd3P09027 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxd3P09027 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxd3P09027 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxd3P09027 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.16□□□□□ -0.78
Hoxd3P09027 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxd3P09027 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.16□□□□□ -0.78
Hoxd3P09027 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxd3P09027 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxd3P09027 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms