Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.24□□□□□ -0.45
ApoeP08226 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.24□□□□□ -0.45
ApoeP08226 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.24□□□□□ -0.45
ApoeP08226 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.24□□□□□ -0.45
ApoeP08226 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.24□□□□□ -0.45
ApoeP08226 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.24□□□□□ -0.45
ApoeP08226 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.24□□□□□ -0.45
ApoeP08226 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ApoeP08226 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ApoeP08226 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ApoeP08226 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ApoeP08226 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.23□□□□□ -0.45
ApoeP08226 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.23□□□□□ -0.45
ApoeP08226 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.23□□□□□ -0.45
ApoeP08226 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.23□□□□□ -0.45
ApoeP08226 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
ApoeP08226 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.23□□□□□ -0.45
ApoeP08226 Gm4875-201ENSMUST00000118257 786 ntBASIC12.23□□□□□ -0.45
ApoeP08226 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ApoeP08226 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ApoeP08226 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.23□□□□□ -0.45
ApoeP08226 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.23□□□□□ -0.45
ApoeP08226 Gm27741-201ENSMUST00000185060 237 ntBASIC12.23□□□□□ -0.45
ApoeP08226 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.23□□□□□ -0.45
ApoeP08226 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.23□□□□□ -0.45
ApoeP08226 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.23□□□□□ -0.45
ApoeP08226 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.23□□□□□ -0.45
ApoeP08226 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.23□□□□□ -0.45
ApoeP08226 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ApoeP08226 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ApoeP08226 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ApoeP08226 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.22□□□□□ -0.45
ApoeP08226 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.22□□□□□ -0.45
ApoeP08226 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
ApoeP08226 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.22□□□□□ -0.45
ApoeP08226 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.22□□□□□ -0.45
ApoeP08226 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.22□□□□□ -0.45
ApoeP08226 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
ApoeP08226 Gm26464-201ENSMUST00000157094 305 ntBASIC12.22□□□□□ -0.45
ApoeP08226 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.22□□□□□ -0.45
ApoeP08226 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.22□□□□□ -0.45
ApoeP08226 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.22□□□□□ -0.45
ApoeP08226 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.22□□□□□ -0.45
ApoeP08226 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.22□□□□□ -0.45
ApoeP08226 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ApoeP08226 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms