Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CfdP03953 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CfdP03953 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
CfdP03953 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
CfdP03953 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.79□□□□□ -0.68
CfdP03953 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.79□□□□□ -0.68
CfdP03953 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.79□□□□□ -0.68
CfdP03953 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CfdP03953 Gm24158-201ENSMUST00000175263 71 ntBASIC10.79□□□□□ -0.68
CfdP03953 Gm43703-201ENSMUST00000200523 763 ntBASIC10.79□□□□□ -0.68
CfdP03953 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Gm5779-201ENSMUST00000218467 910 ntBASIC10.79□□□□□ -0.68
CfdP03953 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.79□□□□□ -0.68
CfdP03953 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CfdP03953 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CfdP03953 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.79□□□□□ -0.68
CfdP03953 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.79□□□□□ -0.68
CfdP03953 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CfdP03953 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.79□□□□□ -0.68
CfdP03953 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CfdP03953 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CfdP03953 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Gm27390-201ENSMUST00000184516 176 ntBASIC10.78□□□□□ -0.68
CfdP03953 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.78□□□□□ -0.68
CfdP03953 Gm29608-201ENSMUST00000190444 463 ntBASIC10.78□□□□□ -0.68
CfdP03953 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.78□□□□□ -0.68
CfdP03953 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.78□□□□□ -0.68
CfdP03953 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CfdP03953 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CfdP03953 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.78□□□□□ -0.68
CfdP03953 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.78□□□□□ -0.68
CfdP03953 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CfdP03953 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms