Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P01788 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01788 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01788 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01788 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
P01788 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
P01788 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.2□□□□□ -0.78
P01788 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.2□□□□□ -0.78
P01788 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
P01788 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
P01788 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.2□□□□□ -0.78
P01788 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.2□□□□□ -0.78
P01788 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.2□□□□□ -0.78
P01788 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Gm37935-201ENSMUST00000192012 982 ntBASIC10.2□□□□□ -0.78
P01788 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.2□□□□□ -0.78
P01788 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.2□□□□□ -0.78
P01788 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
P01788 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P01788 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.19□□□□□ -0.78
P01788 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.19□□□□□ -0.78
P01788 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
P01788 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
P01788 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Gm12151-201ENSMUST00000121374 290 ntBASIC10.19□□□□□ -0.78
P01788 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.19□□□□□ -0.78
P01788 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.19□□□□□ -0.78
P01788 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
P01788 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
P01788 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.19□□□□□ -0.78
P01788 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P01788 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P01788 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.18□□□□□ -0.78
P01788 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
P01788 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.18□□□□□ -0.78
P01788 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01788 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms