Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.69□□□□□ -0.38
ClppO88696 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
ClppO88696 Gm12203-201ENSMUST00000118235 598 ntBASIC12.69□□□□□ -0.38
ClppO88696 Gm12209-201ENSMUST00000120089 596 ntBASIC12.69□□□□□ -0.38
ClppO88696 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
ClppO88696 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.69□□□□□ -0.38
ClppO88696 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Gm37922-201ENSMUST00000195596 455 ntBASIC12.69□□□□□ -0.38
ClppO88696 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
ClppO88696 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.69□□□□□ -0.38
ClppO88696 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ClppO88696 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ClppO88696 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.69□□□□□ -0.38
ClppO88696 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ClppO88696 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.69□□□□□ -0.38
ClppO88696 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClppO88696 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
ClppO88696 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
ClppO88696 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ClppO88696 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ClppO88696 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ClppO88696 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.68□□□□□ -0.38
ClppO88696 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.68□□□□□ -0.38
ClppO88696 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.68□□□□□ -0.38
ClppO88696 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Gm37497-201ENSMUST00000195830 798 ntBASIC12.68□□□□□ -0.38
ClppO88696 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ClppO88696 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ClppO88696 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.68□□□□□ -0.38
ClppO88696 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
ClppO88696 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClppO88696 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ClppO88696 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.67□□□□□ -0.38
ClppO88696 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.67□□□□□ -0.38
ClppO88696 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ClppO88696 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.67□□□□□ -0.38
ClppO88696 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
ClppO88696 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ClppO88696 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ClppO88696 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.67□□□□□ -0.38
ClppO88696 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.67□□□□□ -0.38
ClppO88696 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.67□□□□□ -0.38
ClppO88696 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ClppO88696 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.67□□□□□ -0.38
ClppO88696 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.67□□□□□ -0.38
ClppO88696 Gm6013-201ENSMUST00000212264 699 ntBASIC12.67□□□□□ -0.38
ClppO88696 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClppO88696 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms