Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.94□□□□□ -0.5
Cops4O88544 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.94□□□□□ -0.5
Cops4O88544 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cops4O88544 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cops4O88544 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Cops4O88544 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.94□□□□□ -0.5
Cops4O88544 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Gm27321-201ENSMUST00000185021 205 ntBASIC11.94□□□□□ -0.5
Cops4O88544 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.94□□□□□ -0.5
Cops4O88544 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.94□□□□□ -0.5
Cops4O88544 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cops4O88544 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Cops4O88544 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.94□□□□□ -0.5
Cops4O88544 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.94□□□□□ -0.5
Cops4O88544 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.93□□□□□ -0.5
Cops4O88544 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.93□□□□□ -0.5
Cops4O88544 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.93□□□□□ -0.5
Cops4O88544 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.93□□□□□ -0.5
Cops4O88544 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.93□□□□□ -0.5
Cops4O88544 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.93□□□□□ -0.5
Cops4O88544 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.93□□□□□ -0.5
Cops4O88544 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.93□□□□□ -0.5
Cops4O88544 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Cops4O88544 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Cops4O88544 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cops4O88544 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.93□□□□□ -0.5
Cops4O88544 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cops4O88544 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Cops4O88544 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.92□□□□□ -0.5
Cops4O88544 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.92□□□□□ -0.5
Cops4O88544 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.92□□□□□ -0.5
Cops4O88544 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Gm4875-201ENSMUST00000118257 786 ntBASIC11.92□□□□□ -0.5
Cops4O88544 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.92□□□□□ -0.5
Cops4O88544 Gm13223-201ENSMUST00000118609 747 ntBASIC11.92□□□□□ -0.5
Cops4O88544 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.92□□□□□ -0.5
Cops4O88544 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.92□□□□□ -0.5
Cops4O88544 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cops4O88544 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.92□□□□□ -0.5
Cops4O88544 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.92□□□□□ -0.5
Cops4O88544 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cops4O88544 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.92□□□□□ -0.5
Cops4O88544 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.92□□□□□ -0.5
Cops4O88544 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.92□□□□□ -0.5
Cops4O88544 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.92□□□□□ -0.5
Cops4O88544 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cops4O88544 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops4O88544 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms