Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ebf3O08791 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ebf3O08791 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ebf3O08791 Gm4986-201ENSMUST00000119731 549 ntBASIC13.45□□□□□ -0.26
Ebf3O08791 Gm12363-201ENSMUST00000122250 668 ntBASIC13.45□□□□□ -0.26
Ebf3O08791 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.45□□□□□ -0.26
Ebf3O08791 Mir3102-201ENSMUST00000175555 104 ntBASIC13.45□□□□□ -0.26
Ebf3O08791 Gm3890-201ENSMUST00000182416 207 ntBASIC13.45□□□□□ -0.26
Ebf3O08791 Gm27320-201ENSMUST00000184892 109 ntBASIC13.45□□□□□ -0.26
Ebf3O08791 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.45□□□□□ -0.26
Ebf3O08791 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.45□□□□□ -0.26
Ebf3O08791 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ebf3O08791 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ebf3O08791 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Ebf3O08791 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Ebf3O08791 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Gm11637-201ENSMUST00000120601 592 ntBASIC13.44□□□□□ -0.26
Ebf3O08791 Gm14381-201ENSMUST00000122105 414 ntBASIC13.44□□□□□ -0.26
Ebf3O08791 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Mospd4-201ENSMUST00000180618 576 ntBASIC13.44□□□□□ -0.26
Ebf3O08791 Gm29199-201ENSMUST00000187766 775 ntBASIC13.44□□□□□ -0.26
Ebf3O08791 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.44□□□□□ -0.26
Ebf3O08791 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.44□□□□□ -0.26
Ebf3O08791 Gm7046-201ENSMUST00000221351 977 ntBASIC13.44□□□□□ -0.26
Ebf3O08791 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.44□□□□□ -0.26
Ebf3O08791 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ebf3O08791 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Ebf3O08791 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf3O08791 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.43□□□□□ -0.26
Ebf3O08791 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ebf3O08791 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ebf3O08791 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.43□□□□□ -0.26
Ebf3O08791 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Gm22323-201ENSMUST00000103832 109 ntBASIC13.43□□□□□ -0.26
Ebf3O08791 Gm24255-201ENSMUST00000104481 128 ntBASIC13.43□□□□□ -0.26
Ebf3O08791 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Ebf3O08791 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.43□□□□□ -0.26
Ebf3O08791 Gm28693-202ENSMUST00000190758 331 ntBASIC13.43□□□□□ -0.26
Ebf3O08791 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Gm4768-201ENSMUST00000206199 686 ntBASIC13.43□□□□□ -0.26
Ebf3O08791 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ebf3O08791 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.43□□□□□ -0.26
Ebf3O08791 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.43□□□□□ -0.26
Ebf3O08791 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.43□□□□□ -0.26
Ebf3O08791 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.43□□□□□ -0.26
Ebf3O08791 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ebf3O08791 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ebf3O08791 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ebf3O08791 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms